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Abstract The thawing of ancient organic carbon stored in arctic permafrost soils, and its oxidation to carbon dioxide (CO₂, a greenhouse gas), is predicted to amplify global warming. However, the extent to which organic carbon in thawing permafrost soils will be released as CO₂is uncertain. A critical unknown is the extent to which dissolved organic carbon (DOC) from thawing permafrost soils is respired to CO₂by microbes upon export of freshly thawed DOC to both dark bottom waters and sunlit surface waters. In this study, we quantified the radiocarbon age and¹³C composition of CO₂produced by microbial respiration of DOC that was leached from permafrost soils and either kept in the dark or exposed to ultraviolet and visible wavelengths of light. We show that permafrost DOC most labile to microbial respiration was as old or older (ages 4,000–11,000 a BP) and more¹³C‐depleted than the bulk DOC in both dark and light‐exposed treatments, likely indicating respiration of old,¹³C‐depleted lignin and lipid fractions of the permafrost DOC pool. Light exposure either increased, decreased, or had no effect on the magnitude of microbial respiration of old permafrost DOC relative to respiration in the dark, depending on both the extent of DOC oxidation during exposure to light and the wavelength of light. Together, these findings suggest that photochemical changes affecting the lability of permafrost DOC during sunlight exposure are an important control on the magnitude of microbial respiration of permafrost DOC in arctic surface waters. 

Soil anoxia is common in the annually thawed surface (‘active’) layer of permafrost soils, particularly when soils are saturated, and supports anaerobic microbial metabolism and methane (CH4) production. Rainfall contributes to soil saturation, but can also introduce oxygen, causing soil oxidation and altering anoxic conditions. We simulated a rainfall event in soil mesocosms from two dominant tundra types, tussock tundra and wet sedge tundra, to test the impacts of rainfall‐induced soil oxidation on microbial communities and their metabolic capacity for anaerobic CH4 production and aerobic respiration following soil oxidation. In both types, rainfall increased total soil O2 concentration, but in tussock tundra there was a 2.5‐fold greater increase in soil O2 compared to wet sedge tundra due to differences in soil drainage. Metagenomic and metatranscriptomic analyses found divergent microbial responses to rainfall between tundra types. Active microbial taxa in the tussock tundra community, including bacteria and fungi, responded to rainfall with a decline in gene expression for anaerobic metabolism and a concurrent increase in gene expression for cellular growth. In contrast, the wet sedge tundra community showed no significant changes in microbial gene expression from anaerobic metabolism, fermentation, or methanogenesis following rainfall, despite an initial increase in soil O2 concentration. These results suggest that rainfall induces soil oxidation and enhances aerobic microbial respiration in tussock tundra communities but may not accumulate or remain in wet sedge tundra soils long enough to induce a community‐wide shift from anaerobic metabolism. Thus, rainfall may serve only to maintain saturated soil conditions that promote CH4 production in low‐lying wet sedge tundra soils across the Arctic.